GMO Detection Methodology
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 3, Heft S2, S. 42-42
ISSN: 1661-5867
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In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 3, Heft S2, S. 42-42
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 9, Heft 2, S. 183-190
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 5, Heft 2, S. 189-190
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 5, Heft 2, S. 185-188
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 6, Heft 4, S. 411-417
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 12, Heft 2, S. 189-194
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 12, Heft 1, S. 23-36
ISSN: 1661-5867
In: Journal of consumer protection and food safety: Journal für Verbraucherschutz und Lebensmittelsicherheit : JVL, Band 8, Heft 1-2, S. 51-56
ISSN: 1661-5867
Genetically modified plants, in the following referred to as genetically modified organisms or GMOs, have been commercially grown for almost two decades. In 2010 approximately 10% of the total global crop acreage was planted with GMOs (James, 2011). More than 30 countries have been growing commercial GMOs, and many more have performed field trials. Although the majority of commercial GMOs both in terms of acreage and specific events belong to the four species: soybean, maize, cotton and rapeseed, there are another 20. + species where GMOs are commercialized or in the pipeline for commercialization. The number of GMOs cultivated in field trials or for commercial production has constantly increased during this time period. So have the number of species, the number of countries involved, the diversity of novel (added) genetic elements and the global trade. All of these factors contribute to the increasing complexity of detecting and correctly identifying GMO derived material. Many jurisdictions, including the European Union (EU), legally distinguish between authorized (and therefore legal) and un-authorized (and therefore illegal) GMOs. Information about the developments, field trials, authorizations, cultivation, trade and observations made in the official GMO control laboratories in different countries around the world is often limited, despite several attempts such as the OECD BioTrack for voluntary dissemination of data. This lack of information inevitably makes it challenging to detect and identify GMOs, especially the un-authorized GMOs. The present paper reviews the state of the art technologies and approaches in light of coverage, practicability, sensitivity and limitations. Emphasis is put on exemplifying practical detection of un-authorized GMOs. Although this paper has a European (EU) bias when examples are given, the contents have global relevance.
BASE
Genetically modified plants, in the following referred to as genetically modified organisms or GMOs, have been commercially grown for almost two decades. In 2010 approximately 10% of the total global crop acreage was planted with GMOs (James, 2011). More than 30 countries have been growing commercial GMOs, and many more have performed field trials. Although the majority of commercial GMOs both in terms of acreage and specific events belong to the four species: soybean, maize, cotton and rapeseed, there are another 20 + species where GMOs are commercialized or in the pipeline for commercialization. The number of GMOs cultivated in field trials or for commercial production has constantly increased during this time period. So have the number of species, the number of countries involved, the diversity of novel (added) genetic elements and the global trade. All of these factors contribute to the increasing complexity of detecting and correctly identifying GMO derived material. Many jurisdictions, including the European Union (EU), legally distinguish between authorized (and therefore legal) and un-authorized (and therefore illegal) GMOs. Information about the developments, field trials, authorizations, cultivation, trade and observations made in the official GMO control laboratories in different countries around the world is often limited, despite several attempts such as the OECD BioTrack for voluntary dissemination of data. This lack of information inevitably makes it challenging to detect and identify GMOs, especially the un-authorized GMOs. The present paper reviews the state of the art technologies and approaches in light of coverage, practicability, sensitivity and limitations. Emphasis is put on exemplifying practical detection of un-authorized GMOs. Although this paper has a European (EU) bias when examples are given, the contents have global relevance. ; This review has partly been made possible as a result of the EU-funded integrated project Co-Extra http://www.coextra.eu (contract FOOD-2005-CT-007158) and discussions within an ad hoc working group of the European Network of GMO Laboratories (ENGL) over several years. AHJ is grateful for financial support from the Norwegian Research Council (grants 170363 and 178288). MP is grateful for financial support from the Spanish Ministerio de Ciencia e Innovación (project AGL2010-17181). ; Peer reviewed
BASE
Petunia plants with unusual orange flowers were noticed on the European market and confirmed to be genetically modified (GM) by the Finnish authorities in spring 2017. Later in 2017, inspections and controls performed by several official laboratories of national competent authorities in the European Union detected several GM petunia varieties with orange flowers, but also another group of unusually colored flowers. In the latter group, a so far undetected gene coding for a flavonoid 3'5' hydroxylase (F3'5'H) responsible for the purple color was identified by German and Dutch authorities, suggesting that the petunias found on the markets contain different genetic constructs. Here, a strategy is described for the identification of GM petunia varieties. It is based on an initial GMO screening for known elements using (real-time) PCR and subsequent identification of the insertion sites by a gene walking-like approach called ALF (amplification of linearly-enriched fragments) in combination with Sanger and MinION sequencing. The results indicate that the positively identified GM petunias can be traced back to two dissimilar GM events used for breeding of the different varieties. The test results also confirm that the transgenic petunia event RL01-17 used in the first German field trial in 1991 is not the origin of the GM petunias sold on the market. On basis of the obtained sequence data, event-specific real-time PCR confirmatory methods were developed and validated. These methods are applicable for the rapid detection and identification of GM petunias in routine analysis. In addition, a decision support system was developed for revealing the most likely origin of the GM petunia.
BASE
Petunia plants with unusual orange flowers were noticed on the European market and confirmed to be genetically modified (GM) by the Finnish authorities in spring 2017. Later in 2017, inspections and controls performed by several official laboratories of national competent authorities in the European Union detected several GM petunia varieties with orange flowers, but also another group of unusually colored flowers. In the latter group, a so far undetected gene coding for a flavonoid 3'5' hydroxylase (F3'5'H) responsible for the purple color was identified by German and Dutch authorities, suggesting that the petunias found on the markets contain different genetic constructs. Here, a strategy is described for the identification of GM petunia varieties. It is based on an initial GMO screening for known elements using (real-time) PCR and subsequent identification of the insertion sites by a gene walking-like approach called ALF (amplification of linearly-enriched fragments) in combination with Sanger and MinION sequencing. The results indicate that the positively identified GM petunias can be traced back to two dissimilar GM events used for breeding of the different varieties. The test results also confirm that the transgenic petunia event RL01-17 used in the first German field trial in 1991 is not the origin of the GM petunias sold on the market. On basis of the obtained sequence data, event-specific real-time PCR confirmatory methods were developed and validated. These methods are applicable for the rapid detection and identification of GM petunias in routine analysis. In addition, a decision support system was developed for revealing the most likely origin of the GM petunia.
BASE
In: EFSA supporting publications, Band 15, Heft 11
ISSN: 2397-8325